Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs7915269 chr10:74853320 G/A 1.1E-14 287 26.37 21.97 5.6 KM Plot
KIRP rs79155348 chr6:7588353 G/A 2.9E-14 282 25.78 25.7 8.03 KM Plot
KIRP rs79168640 chr15:57633235 G/A 0 284 25.63 26.62 4.07 KM Plot
KIRP rs7918290 chr10:43190513 T/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs7918909 chr10:94660689 G/A 7.06E-6 288 26.28 25.23 10.97 KM Plot
KIRP rs79193599 chr17:79651490 C/A 1.16E-6 285 24.8 28.03 8.4 KM Plot
KIRP rs7922726 chr10:88213705 C/G 5.63E-8 286 26.38 22.57 9.77 KM Plot
KIRP rs7924702 chr11:49450356 A/C 0.000195 289 26.4 22.8 12.07 KM Plot
KIRP rs79258182 chr6:148661437 G/C 9.73E-5 286 26.4 18.07 18.2 KM Plot
KIRP rs79269798 chr10:43172961 T/C 6.46E-5 288 25.57 27.75 11.43 KM Plot
KIRP rs79277195 chr16:90084895 C/G 1.3E-7 285 23.6 34.97 10.7 KM Plot
KIRP rs79279812 chr1:4008569 C/T 0 276 24.8 31.05 4.07 KM Plot
KIRP rs79284134 chr21:44229857 A/G 0.000162 286 25.53 43.53 13.07 KM Plot
KIRP rs79287552 chr15:57592248 C/T 0 284 25.6 21.9 4.07 KM Plot
KIRP rs79295798 chr13:42384943 T/C 1.33E-14 287 25.97 21.68 8.03 KM Plot